Index

_

__init__() (pybbn.causality.ace.Ace method) (pybbn.gaussian.inference.GaussianInference method) (pybbn.graph.dag.Bbn method) (pybbn.graph.dag.Dag method) (pybbn.graph.dag.PathDetector method) (pybbn.graph.edge.Edge method) (pybbn.graph.edge.JtEdge method) (pybbn.graph.edge.SepSetEdge method) (pybbn.graph.graph.Graph method) (pybbn.graph.graph.Ug method) (pybbn.graph.jointree.Evidence method) (pybbn.graph.jointree.EvidenceBuilder method) (pybbn.graph.jointree.JoinTree method) (pybbn.graph.jointree.PathDetector method) (pybbn.graph.pdag.PathDetector method) (pybbn.graph.pdag.Pdag method) (pybbn.graph.potential.Potential method) (pybbn.graph.potential.PotentialEntry method) (pybbn.graph.variable.Variable method) (pybbn.pptc.evidencecollector.EvidenceCollector method) (pybbn.pptc.evidencedistributor.EvidenceDistributor method) (pybbn.pptc.triangulator.NodeClique method) (pybbn.sampling.sampling.LogicSampler method) (pybbn.sampling.sampling.SortableNode method) (pybbn.sampling.sampling.Table method)

A

Ace (class in pybbn.causality.ace) add() (pybbn.graph.potential.PotentialEntry method) add_edge() (pybbn.graph.graph.Graph method) (pybbn.graph.jointree.JoinTree method) add_entry() (pybbn.graph.potential.Potential method)

add_metadata() (pybbn.graph.node.Node method) add_node() (pybbn.graph.graph.Graph method) add_potential() (pybbn.graph.jointree.JoinTree method) add_value() (pybbn.graph.jointree.Evidence method) apply() (pybbn.pptc.inferencecontroller.InferenceController static method) apply_from_serde() (pybbn.pptc.inferencecontroller.InferenceController static method)

B

Bbn (class in pybbn.graph.dag) BbnNode (class in pybbn.graph.node)

BbnUtil (class in pybbn.graph.dag) build() (pybbn.graph.jointree.EvidenceBuilder method)

C

ChangeType (class in pybbn.graph.jointree) Clique (class in pybbn.graph.node) collect_evidence() (pybbn.pptc.propagator.Propagator static method) compare() (pybbn.graph.jointree.Evidence method)

contains() (pybbn.graph.node.Clique method) convert_for_drawing() (in module pybbn.generator.bbngenerator) convert_for_exact_inference() (in module pybbn.generator.bbngenerator) cost (pybbn.graph.node.SepSet property)

D

Dag (class in pybbn.graph.dag) DIRECTED (pybbn.graph.edge.EdgeType attribute) directed_edge_exists() (pybbn.graph.pdag.Pdag method) distribute_evidence() (pybbn.pptc.propagator.Propagator static method)

divide() (pybbn.graph.potential.PotentialUtil static method) do_inference() (pybbn.gaussian.inference.GaussianInference method) do_inferences() (pybbn.gaussian.inference.GaussianInference method) duplicate() (pybbn.graph.potential.PotentialEntry method) (pybbn.pptc.triangulator.Triangulator static method)

E

Edge (class in pybbn.graph.edge) edge_exists() (pybbn.graph.dag.Dag method) (pybbn.graph.graph.Graph method) (pybbn.graph.pdag.Pdag method) EdgeType (class in pybbn.graph.edge) Evidence (class in pybbn.graph.jointree) evidence_retracted() (pybbn.graph.jointree.JoinTreeListener method) (pybbn.pptc.inferencecontroller.InferenceController method)

evidence_updated() (pybbn.graph.jointree.JoinTreeListener method) (pybbn.pptc.inferencecontroller.InferenceController method) EvidenceBuilder (class in pybbn.graph.jointree) EvidenceCollector (class in pybbn.pptc.evidencecollector) EvidenceDistributor (class in pybbn.pptc.evidencedistributor) EvidenceType (class in pybbn.graph.jointree) exists() (pybbn.graph.dag.PathDetector method) (pybbn.graph.jointree.PathDetector method) (pybbn.graph.pdag.PathDetector method)

F

Factory (class in pybbn.graph.factory) find_cliques_with_node_and_parents() (pybbn.graph.jointree.JoinTree method) FINDING (pybbn.graph.jointree.EvidenceType attribute) from_csv() (pybbn.graph.dag.Bbn static method) from_data() (pybbn.graph.factory.Factory static method)

from_dict() (pybbn.graph.dag.Bbn static method) (pybbn.graph.jointree.JoinTree static method) from_json() (pybbn.graph.dag.Bbn static method) from_libpgm_discrete_dictionary() (pybbn.graph.factory.Factory static method) from_libpgm_discrete_json() (pybbn.graph.factory.Factory static method) from_libpgm_discrete_object() (pybbn.graph.factory.Factory static method)

G

GaussianInference (class in pybbn.gaussian.inference) generate_bbn_to_file() (in module pybbn.generator.bbngenerator) generate_cliques() (pybbn.pptc.triangulator.Triangulator static method) generate_multi_bbn() (in module pybbn.generator.bbngenerator) generate_singly_bbn() (in module pybbn.generator.bbngenerator) get_ace() (pybbn.causality.ace.Ace method) get_bbn_node() (pybbn.graph.jointree.JoinTree method) get_bbn_node_and_parents() (pybbn.graph.jointree.JoinTree method) get_bbn_node_by_name() (pybbn.graph.jointree.JoinTree method) get_bbn_nodes() (pybbn.graph.jointree.JoinTree method) (pybbn.pptc.triangulator.NodeClique method) get_bbn_potential() (pybbn.graph.jointree.JoinTree method) get_cartesian_product() (pybbn.graph.potential.PotentialUtil static method) get_change_type() (pybbn.graph.jointree.JoinTree method) get_children() (pybbn.graph.dag.Dag method) get_clique() (pybbn.pptc.initializer.Initializer static method) get_cliques() (pybbn.graph.jointree.JoinTree method) get_cost() (pybbn.graph.node.SepSet method) get_edges() (pybbn.graph.graph.Graph method) get_edges_to_add() (pybbn.pptc.triangulator.Triangulator static method) get_entry_keys() (pybbn.graph.potential.PotentialEntry method) get_evidence() (pybbn.graph.jointree.JoinTree method) get_flattened_edges() (pybbn.graph.jointree.JoinTree method) get_huang_graph() (pybbn.graph.dag.BbnUtil static method) get_i2n() (pybbn.graph.dag.Dag method) get_kv() (pybbn.graph.potential.PotentialEntry method) get_lhs_edge() (pybbn.graph.edge.JtEdge method)

get_mass() (pybbn.graph.node.SepSet method) get_matching_entries() (pybbn.graph.potential.Potential method) get_n2i() (pybbn.graph.dag.Dag method) get_neighbors() (pybbn.graph.graph.Graph method) get_node() (pybbn.graph.graph.Graph method) get_node_ids() (pybbn.graph.node.Clique method) get_nodes() (pybbn.graph.graph.Graph method) get_out_nodes() (pybbn.graph.pdag.Pdag method) get_parents() (pybbn.graph.dag.Dag method) (pybbn.graph.pdag.Pdag method) get_parents_ordered() (pybbn.graph.dag.Bbn method) get_posteriors() (pybbn.graph.jointree.JoinTree method) get_potential() (pybbn.graph.potential.PotentialUtil static method) get_potential_from_nodes() (pybbn.graph.potential.PotentialUtil static method) get_rhs_edge() (pybbn.graph.edge.JtEdge method) get_samples() (pybbn.sampling.sampling.LogicSampler method) get_sep_set() (pybbn.graph.node.Clique method) get_sep_sets() (pybbn.graph.jointree.JoinTree method) (pybbn.pptc.transformer.Transformer static method) get_sid() (pybbn.graph.node.Clique method) get_simple() (pybbn.graph.dag.BbnUtil static method) get_unobserved_evidence() (pybbn.graph.jointree.JoinTree method) get_value() (pybbn.sampling.sampling.Table method) get_weight() (pybbn.graph.node.BbnNode method) (pybbn.graph.node.Clique method) (pybbn.pptc.triangulator.Triangulator static method) Graph (class in pybbn.graph.graph)

H

has_parents() (pybbn.sampling.sampling.Table method)

hash_string() (pybbn.graph.util.IdUtil static method)

I

IdUtil (class in pybbn.graph.util) InferenceController (class in pybbn.pptc.inferencecontroller) init() (pybbn.pptc.potentialinitializer.PotentialInitializer static method) initialize() (pybbn.pptc.initializer.Initializer static method) Initializer (class in pybbn.pptc.initializer)

intersects() (pybbn.graph.node.Clique method) is_empty (pybbn.graph.node.SepSet property) is_marked() (pybbn.graph.node.Clique method) is_subset() (pybbn.pptc.triangulator.Triangulator static method) is_superset() (pybbn.graph.node.Clique method) is_zero() (pybbn.graph.potential.PotentialUtil static method)

J

JoinTree (class in pybbn.graph.jointree)

JoinTreeListener (class in pybbn.graph.jointree) JtEdge (class in pybbn.graph.edge)

K

key (pybbn.graph.edge.Edge property)

L

LogicSampler (class in pybbn.sampling.sampling)

M

marginalize_for() (pybbn.graph.potential.PotentialUtil static method) marginals (pybbn.gaussian.inference.GaussianInference property) mark() (pybbn.graph.node.Clique method) mass (pybbn.graph.node.SepSet property) matches() (pybbn.graph.potential.PotentialEntry method) merge() (pybbn.graph.potential.PotentialUtil static method) module pybbn.causality.ace pybbn.gaussian.inference pybbn.generator.bbngenerator pybbn.graph.dag pybbn.graph.edge pybbn.graph.factory pybbn.graph.graph pybbn.graph.jointree pybbn.graph.node pybbn.graph.pdag pybbn.graph.potential pybbn.graph.util pybbn.graph.variable pybbn.pptc.evidencecollector pybbn.pptc.evidencedistributor pybbn.pptc.inferencecontroller pybbn.pptc.initializer pybbn.pptc.moralizer pybbn.pptc.potentialinitializer pybbn.pptc.propagator pybbn.pptc.transformer pybbn.pptc.triangulator pybbn.sampling.sampling

moralize() (pybbn.pptc.moralizer.Moralizer static method) Moralizer (class in pybbn.pptc.moralizer) multiply() (pybbn.graph.potential.PotentialUtil static method)

N

Node (class in pybbn.graph.node) NodeClique (class in pybbn.pptc.triangulator)

NONE (pybbn.graph.jointree.ChangeType attribute) normalize() (pybbn.graph.potential.PotentialUtil static method)

O

OBSERVATION (pybbn.graph.jointree.EvidenceType attribute)

P

P (pybbn.gaussian.inference.GaussianInference property) pass_single_message() (pybbn.graph.potential.PotentialUtil static method) PathDetector (class in pybbn.graph.dag) (class in pybbn.graph.jointree) (class in pybbn.graph.pdag) Pdag (class in pybbn.graph.pdag) Potential (class in pybbn.graph.potential) PotentialEntry (class in pybbn.graph.potential) PotentialInitializer (class in pybbn.pptc.potentialinitializer) PotentialUtil (class in pybbn.graph.potential) propagate() (pybbn.pptc.propagator.Propagator static method) Propagator (class in pybbn.pptc.propagator) pybbn.causality.ace module pybbn.gaussian.inference module pybbn.generator.bbngenerator module pybbn.graph.dag module pybbn.graph.edge module pybbn.graph.factory module pybbn.graph.graph module pybbn.graph.jointree module pybbn.graph.node module

pybbn.graph.pdag module pybbn.graph.potential module pybbn.graph.util module pybbn.graph.variable module pybbn.pptc.evidencecollector module pybbn.pptc.evidencedistributor module pybbn.pptc.inferencecontroller module pybbn.pptc.initializer module pybbn.pptc.moralizer module pybbn.pptc.potentialinitializer module pybbn.pptc.propagator module pybbn.pptc.transformer module pybbn.pptc.triangulator module pybbn.sampling.sampling module

R

reapply() (pybbn.pptc.inferencecontroller.InferenceController static method) reinit() (pybbn.pptc.potentialinitializer.PotentialInitializer static method)

remove_node() (pybbn.graph.graph.Graph method) RETRACTION (pybbn.graph.jointree.ChangeType attribute)

S

sample_marginals() (pybbn.gaussian.inference.GaussianInference method) select_node() (pybbn.pptc.triangulator.Triangulator static method) SepSet (class in pybbn.graph.node) SepSetEdge (class in pybbn.graph.edge)

set_listener() (pybbn.graph.jointree.JoinTree method) set_observation() (pybbn.graph.jointree.JoinTree method) SortableNode (class in pybbn.sampling.sampling) start() (pybbn.pptc.evidencecollector.EvidenceCollector method) (pybbn.pptc.evidencedistributor.EvidenceDistributor method)

T

Table (class in pybbn.sampling.sampling) to_csv() (pybbn.graph.dag.Bbn static method) to_dict() (pybbn.graph.dag.Bbn static method) (pybbn.graph.jointree.JoinTree static method) (pybbn.graph.node.BbnNode method) (pybbn.graph.potential.Potential static method) (pybbn.graph.variable.Variable method)

to_dne() (pybbn.graph.dag.Bbn static method) to_json() (in module pybbn.generator.bbngenerator) (pybbn.graph.dag.Bbn static method) to_nx_graph() (pybbn.graph.dag.Dag method) transform() (pybbn.pptc.transformer.Transformer static method) Transformer (class in pybbn.pptc.transformer) triangulate() (pybbn.pptc.triangulator.Triangulator static method) Triangulator (class in pybbn.pptc.triangulator)

U

Ug (class in pybbn.graph.graph) UNDIRECTED (pybbn.graph.edge.EdgeType attribute) unmark() (pybbn.graph.node.Clique method) unmark_cliques() (pybbn.graph.jointree.JoinTree method) UNOBSERVE (pybbn.graph.jointree.EvidenceType attribute)

unobserve() (pybbn.graph.jointree.JoinTree method) unobserve_all() (pybbn.graph.jointree.JoinTree method) UPDATE (pybbn.graph.jointree.ChangeType attribute) update_bbn_cpts() (pybbn.graph.jointree.JoinTree method) update_evidences() (pybbn.graph.jointree.JoinTree method)

V

validate() (pybbn.graph.jointree.Evidence method)

Variable (class in pybbn.graph.variable) VIRTUAL (pybbn.graph.jointree.EvidenceType attribute)

W

with_evidence() (pybbn.graph.jointree.EvidenceBuilder method)

with_node() (pybbn.graph.jointree.EvidenceBuilder method) with_type() (pybbn.graph.jointree.EvidenceBuilder method)